Installation#

Requirements#

  • Python 3.11 or higher

  • pip or uv package manager

Install from PyPI#

Using pip (recommended):

pip install meeg-utils

Using uv:

uv pip install meeg-utils

Install from Source#

For development or latest features:

# Clone repository
git clone https://github.com/colehank/meeg-utils.git
cd meeg-utils

# Install with uv (recommended for development)
uv sync

Dependencies#

Installed automatically:

  • mne (>=1.13.2) - MEG/EEG data structures and processing

  • mne-bids (>=0.20) - BIDS reading and writing

  • mne-denoise (>=0.0.3) - ZapLine and ZapLine-plus line-noise removal

  • pyprep (>=0.9) - PREP bad-channel detection for EEG

  • mne-icalabel (>=0.10) and onnxruntime - ICLabel / MEGnet component labels

  • autoreject (>=0.5.1) - epoch rejection and repair

  • scikit-learn (>=1.5) - estimator conventions (clone, parameters)

  • pyyaml, joblib, loguru

Verify Installation#

import meeg_utils as meu
print(meu.__version__)
print(meu.presets.available())

meu --help